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VarSome Help Center
FAQ & Troubleshooting
Registration & Billing
User account management
Storage management
Pricing and Billing
Management of Samples and Analyses
Uploading files
Managing Workflows
Launching analyses
Analysis of the results
Analyses
Results
Filters
Reporting
Quality Control
Legal & compliance
FAQ & Troubleshooting
Troubleshooting
General
Filters
User Interface
Pipelines
Features
Scientific articles
VarSome API
FAQ & Troubleshooting
Answers for frequently asked questions from users and clients. Provide solution to known issues
CNV Quality Control: tools and guidelines
VCF attributes explained
How can I submit to ClinVar?
How can I inspect my analysis results on more than one monitors?
Mitochondrial variant calling
How can I use a gene list analysis for CNV calling?
Troubleshooting
Why can't I see the variant table or log into VarSome Clinical?
Why is the variant annotation different on VarSome and VarSome Clinical?
Assay missing in the list
General
Pseudogenes
Mitochondrial genome versions
How can I link a publication to a variant?
What are the requirements for the trial period of VarSome Clinical?
Variant Sharing Program
Phasing
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Filters
How can I filter my results by Frequency or Pathogenicity ?
How can I filter out artefacts from my samples?
User Interface
How can I quickly check the coverage for a specific exon of a given transcript or gene?
Adding an assay to VarSome Clinical
Downloading variant annotation data
Investigating exon coverage
Why do the clinical cards not change when I select one variant?
How can I launch an analysis of several independent samples?
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Pipelines
Variant calling local reassembly
Variant calling and quality filters
Is there a minimum length of CNVs that can be detected by the CNV calling pipeline?
Splicing variants
Joint calling
How is frequency calculated for CNV calls?
Targeted/Untargeted Calling on VarSome Clinical
Alignment and Calling
Which reference genome is being used to align the reads?
How can I validate my laboratory pipeline and bioinformatics results?
Can I reuse a standard set of control samples to call CNVs?
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Features
3D Protein Viewer
What is VarSome Picks?
What is VarSome Clinical PGx?
