How to sort the data in such a way that the coding missenses are always on top? Currently, they are somewhere in between the introns etc. but we are mostly interested in the coding ones.
We sort by pathogenicity, and the most pathogenic variants are usually coding. In the rare cases where that isn't the case, then an intronic variant that is more pathogenic than a coding one will be sorted first. The simplest way around this is to use a soft filter and select only coding variants. That doesn't affect the results of the analysis, the user can simply activate and deactivate the filter with a single click and can choose to see only coding or everything each time.